U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100826230 transcription factor DIVARICATA [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100826230, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100826230
Gene description
transcription factor DIVARICATA
Locus tag
BRADI_2g23710v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (21398480..21400596)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (21391738..21393752)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene probable anion transporter 2, chloroplastic Neighboring gene uncharacterized LOC112270800 Neighboring gene UPF0503 protein At3g09070, chloroplastic Neighboring gene beta-glucosidase BoGH3B Neighboring gene coronatine-insensitive protein homolog 1b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor DIVARICATA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    21398480..21400596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003568292.4 → XP_003568340.1  transcription factor DIVARICATA

    UniProtKB/TrEMBL
    I1HIW6
    Conserved Domains (3) summary
    smart00717
    Location:140 → 189
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd00167
    Location:30 → 73
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    cl21498
    Location:138 → 190
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases