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LOC100821055 ethylene-responsive transcription factor RAP2-11 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100821055, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100821055
Gene description
ethylene-responsive transcription factor RAP2-11
Locus tag
BRADI_1g23756v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (19152894..19154113)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (19153625..19154764)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene beta-hexosaminidase 2 Neighboring gene uncharacterized LOC104584100 Neighboring gene importin-5 Neighboring gene putative cyclin-dependent kinase F-2 Neighboring gene tubulin alpha-1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor RAP2-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    19152894..19154113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014896462.2 → XP_014751948.1  ethylene-responsive transcription factor RAP2-11

    UniProtKB/TrEMBL
    A0A0Q3JU15
    Conserved Domains (1) summary
    cd00018
    Location:50 → 108
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein Strain
Heading Accession and Version

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