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LOC100819004 squamosa promoter-binding-like protein 14 [ Glycine max (soybean) ]

Gene ID: 100819004, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100819004
Gene description
squamosa promoter-binding-like protein 14
Locus tag
GLYMA_07G159300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (20009215..20016032, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (20145446..20151817, complement)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial Neighboring gene probable transcription factor At3g04930 Neighboring gene probable WRKY transcription factor 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    20009215..20016032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006583634.4 → XP_006583697.1  squamosa promoter-binding-like protein 14 isoform X2

    UniProtKB/TrEMBL
    K7L214
    Conserved Domains (3) summary
    sd00045
    Location:783 → 821
    ANK; ANK repeat [structural motif]
    pfam03110
    Location:103 → 177
    SBP; SBP domain
    pfam12796
    Location:740 → 854
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_003530274.5 → XP_003530322.1  squamosa promoter-binding-like protein 14 isoform X1

    UniProtKB/TrEMBL
    I1KKM7
    Conserved Domains (2) summary
    sd00045
    Location:810 → 848
    ANK; ANK repeat [structural motif]
    pfam03110
    Location:103 → 176
    SBP; SBP domain
Nucleotide Protein
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