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LOC100811274 zinc finger protein JACKDAW [ Glycine max (soybean) ]

Gene ID: 100811274, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100811274
Gene description
zinc finger protein JACKDAW
Locus tag
GLYMA_10G051500v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (4590051..4593369)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (4622654..4626013)

Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase RHG1A Neighboring gene syntaxin-71 Neighboring gene dystrophia myotonica WD repeat-containing protein Neighboring gene uncharacterized LOC100811800

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein JACKDAW

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    4590051..4593369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006588713.4 → XP_006588776.1  zinc finger protein JACKDAW

    See identical proteins and their annotated locations for XP_006588776.1

    UniProtKB/TrEMBL
    I1L8U2
    Conserved Domains (1) summary
    sd00017
    Location:67 → 87
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_014762991.3 → XP_014618477.1  zinc finger protein JACKDAW

    UniProtKB/TrEMBL
    I1L8U2
    Conserved Domains (1) summary
    sd00017
    Location:67 → 87
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_003536936.5 → XP_003536984.1  zinc finger protein JACKDAW

    See identical proteins and their annotated locations for XP_003536984.1

    UniProtKB/TrEMBL
    I1L8U2
    Conserved Domains (1) summary
    sd00017
    Location:67 → 87
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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