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LOC100800971 probable pectinesterase/pectinesterase inhibitor 41 [ Glycine max (soybean) ]

Gene ID: 100800971, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100800971
Gene description
probable pectinesterase/pectinesterase inhibitor 41
Locus tag
GLYMA_19G212300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 19 NC_038255.2 (47123484..47125890, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 19 NC_038255.1 (46596007..46598407, complement)

Chromosome 19 - NC_038255.2Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase ATX3 Neighboring gene uncharacterized LOC102667060 Neighboring gene probable pectinesterase/pectinesterase inhibitor 7 Neighboring gene probable pectinesterase/pectinesterase inhibitor 20 Neighboring gene probable pectinesterase/pectinesterase inhibitor 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectinesterase/pectinesterase inhibitor 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038255.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    47123484..47125890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003554481.5 → XP_003554529.1  probable pectinesterase/pectinesterase inhibitor 41

    See identical proteins and their annotated locations for XP_003554529.1

    UniProtKB/TrEMBL
    I1NB83
    Conserved Domains (1) summary
    PLN02713
    Location:19 → 555
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
Nucleotide Protein
Heading Accession and Version

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