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L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100772152, updated on 8-Mar-2024

Summary

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Gene symbol
L3mbtl1
Gene description
L3MBTL histone methyl-lysine binding protein 1
Locus tag
I79_008494
See related
Ensembl:ENSCGRG00015022886
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See L3mbtl1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
22
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613873.1 (1705547..1733905)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (16541016..16570119, complement)

NW_003613873.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene serine and arginine rich splicing factor 6 Neighboring gene serum/glucocorticoid regulated kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lethal(3)malignant brain tumor-like protein 1
Names
L3MBTL1, histone methyl-lysine binding protein
Lethal(3)malignant brain tumor-like protein
l(3)mbt-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613873.1 Reference CriGri_1.0 Primary Assembly

    Range
    1705547..1733905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035455609.1 → XP_035311500.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QBU9
    Conserved Domains (3) summary
    cd09582
    Location:753 → 818
    SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
    smart00561
    Location:393 → 489
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam01530
    Location:629 → 657
    zf-C2HC; Zinc finger, C2HC type

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    16541016..16570119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446786.1 → XP_035302677.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QBU9, A0A9J7KAP6
    Related
    ENSCGRP00015030452.1, ENSCGRT00015037224.2
    Conserved Domains (3) summary
    cd09582
    Location:753 → 818
    SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
    smart00561
    Location:393 → 489
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam01530
    Location:629 → 657
    zf-C2HC; Zinc finger, C2HC type

  2. XM_035446787.1 → XP_035302678.1  lethal(3)malignant brain tumor-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QBU9, A0A9J7K977
    Conserved Domains (3) summary
    smart00561
    Location:411 → 507
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam01530
    Location:647 → 675
    zf-C2HC; Zinc finger, C2HC type
    cl15755
    Location:776 → 815
    SAM_superfamily; SAM (Sterile alpha motif )

  3. XM_035446788.1 → XP_035302679.1  lethal(3)malignant brain tumor-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C2QBU9, A0A9J7H1H2
    Conserved Domains (3) summary
    smart00561
    Location:411 → 507
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam01530
    Location:647 → 675
    zf-C2HC; Zinc finger, C2HC type
    cl15755
    Location:771 → 799
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein Strain
Heading Accession and Version

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