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Lemd3 LEM domain containing 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770973, updated on 8-Mar-2024

Summary

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Gene symbol
Lemd3
Gene description
LEM domain containing 3
See related
Ensembl:ENSCGRG00015003284
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613642.1 (158039..199491)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (135842578..135885292)

NW_003613642.1Genomic Context describing neighboring genes Neighboring gene WNT inhibitory factor 1 Neighboring gene uncharacterized LOC118238229 Neighboring gene methionine sulfoxide reductase B3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear envelope organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inner nuclear membrane protein Man1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613642.1 Reference CriGri_1.0 Primary Assembly

    Range
    158039..199491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497142.4 → XP_003497190.3  inner nuclear membrane protein Man1 isoform X1

    Conserved Domains (2) summary
    pfam09402
    Location:219 → 431
    MSC; Man1-Src1p-C-terminal domain
    cd12286
    Location:468 → 559
    RRM_Man1; RNA recognition motif (RRM) found in inner nuclear membrane protein Man1 (Man1) and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    135842578..135885292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027392308.2 → XP_027248109.1  inner nuclear membrane protein Man1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2L897, A0A9J7F616
    Related
    ENSCGRP00015004163.1, ENSCGRT00015005151.2
Nucleotide Protein Strain
Heading Accession and Version

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