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Znf248 zinc finger protein 248 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770262, updated on 8-Mar-2024

Summary

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Gene symbol
Znf248
Gene description
zinc finger protein 248
See related
Ensembl:ENSCGRG00015006263
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614048.1 (127593..143025)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (26442150..26457592)

NW_003614048.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 30A Neighboring gene zinc finger protein 33B-like Neighboring gene zinc finger protein 25 Neighboring gene BMS1 ribosome biogenesis factor Neighboring gene ret proto-oncogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 248

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614048.1 Reference CriGri_1.0 Primary Assembly

    Range
    127593..143025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016976579.3 → XP_016832068.1  zinc finger protein 248 isoform X1

    UniProtKB/TrEMBL
    G3HKS7
    Conserved Domains (5) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:402 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:490 → 510
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:488 → 510
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:530 → 555
    zf-H2C2_2; Zinc-finger double domain

  2. XM_016976580.3 → XP_016832069.1  zinc finger protein 248 isoform X1

    UniProtKB/TrEMBL
    G3HKS7
    Conserved Domains (5) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:402 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:490 → 510
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:488 → 510
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:530 → 555
    zf-H2C2_2; Zinc-finger double domain

  3. XM_035457055.1 → XP_035312946.1  zinc finger protein 248 isoform X1

    UniProtKB/TrEMBL
    G3HKS7
    Conserved Domains (5) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:402 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:490 → 510
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:488 → 510
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:530 → 555
    zf-H2C2_2; Zinc-finger double domain

  4. XM_016976581.3 → XP_016832070.1  zinc finger protein 248 isoform X2

    UniProtKB/TrEMBL
    A0A9J7GFT1
    Conserved Domains (3) summary
    COG5048
    Location:301 → 367
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:389 → 409
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:429 → 454
    zf-H2C2_2; Zinc-finger double domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    26442150..26457592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027429253.2 → XP_027285054.1  zinc finger protein 248 isoform X1

    UniProtKB/TrEMBL
    A0A9J7GIC1
    Related
    ENSCGRP00015053111.1, ENSCGRT00015054859.1

  2. XM_027429252.2 → XP_027285053.1  zinc finger protein 248 isoform X1

    UniProtKB/TrEMBL
    A0A9J7GIC1
    Related
    ENSCGRP00015008049.2, ENSCGRT00015009933.2

  3. XM_027429254.2 → XP_027285055.1  zinc finger protein 248 isoform X2

    UniProtKB/TrEMBL
    A0A9J7GFT1
Nucleotide Protein Strain
Heading Accession and Version

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