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Elp1 elongator acetyltransferase complex subunit 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767755, updated on 8-Mar-2024

Summary

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Gene symbol
Elp1
Gene description
elongator acetyltransferase complex subunit 1
See related
Ensembl:ENSCGRG00015027604
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Ikbkap
Orthologs
human mouse all
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Genomic context

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See Elp1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
39
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613807.1 (1140754..1199516, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (87087490..87146301)

NW_003613807.1Genomic Context describing neighboring genes Neighboring gene actin like 7B Neighboring gene actin like 7A Neighboring gene actin binding transcription modulator Neighboring gene catenin alpha like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The E3 ubiquitin ligases, HUWE1 and NEDD4-1, are involved in the post-translational regulation of the ABCG1 and ABCG4 lipid transporters. Aleidi SM, et al. J Biol Chem, 2015 Oct 2. PMID 26296893, Free PMC Article
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of elongator holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongator complex protein 1
Names
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613807.1 Reference CriGri_1.0 Primary Assembly

    Range
    1140754..1199516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007641485.4 → XP_007639675.1  elongator complex protein 1 isoform X1

    See identical proteins and their annotated locations for XP_007639675.1

    UniProtKB/TrEMBL
    A0A8C2QME5, G3H9F5
    Conserved Domains (4) summary
    COG0457
    Location:875 → 1100
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG5290
    Location:71 → 1271
    COG5290; IkappaB kinase complex, IKAP component [Transcription]
    pfam04762
    Location:1 → 954
    IKI3; IKI3 family
    sd00039
    Location:112 → 147
    7WD40; WD40 repeat [structural motif]

  2. XM_003500752.5 → XP_003500800.1  elongator complex protein 1 isoform X1

    See identical proteins and their annotated locations for XP_003500800.1

    UniProtKB/TrEMBL
    A0A8C2QME5, G3H9F5
    Conserved Domains (4) summary
    COG0457
    Location:875 → 1100
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG5290
    Location:71 → 1271
    COG5290; IkappaB kinase complex, IKAP component [Transcription]
    pfam04762
    Location:1 → 954
    IKI3; IKI3 family
    sd00039
    Location:112 → 147
    7WD40; WD40 repeat [structural motif]

  3. XM_016974796.3 → XP_016830285.1  elongator complex protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QME5, G3H9F5
    Conserved Domains (4) summary
    COG0457
    Location:875 → 1100
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG5290
    Location:71 → 1271
    COG5290; IkappaB kinase complex, IKAP component [Transcription]
    pfam04762
    Location:1 → 954
    IKI3; IKI3 family
    sd00039
    Location:112 → 147
    7WD40; WD40 repeat [structural motif]

  4. XM_016974797.3 → XP_016830286.1  elongator complex protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QME5, A0A9J7FFA5

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    87087490..87146301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027403056.2 → XP_027258857.1  elongator complex protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QME5, G3H9F5

  2. XM_027403054.2 → XP_027258855.1  elongator complex protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QME5, G3H9F5
    Related
    ENSCGRP00015036808.1, ENSCGRT00015044889.2

  3. XM_027403057.2 → XP_027258858.1  elongator complex protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QME5, A0A9J7FFA5

  4. XM_027403055.2 → XP_027258856.1  elongator complex protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QME5, G3H9F5
Nucleotide Protein Strain
Heading Accession and Version

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