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Dpf2 double PHD fingers 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767725, updated on 8-Mar-2024

Summary

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Gene symbol
Dpf2
Gene description
double PHD fingers 2
See related
Ensembl:ENSCGRG00015014613
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616698.1 (36419..51953, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (53431779..53447319)

NW_003616698.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 45 Neighboring gene tigger transposable element derived 3 Neighboring gene U6 spliceosomal RNA Neighboring gene CDC42 effector protein 2 Neighboring gene DNA polymerase alpha 2, accessory subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nBAF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ubi-d4
Names
D4, zinc and double PHD fingers family 2
Zinc finger protein ubi-d4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616698.1 Reference CriGri_1.0 Primary Assembly

    Range
    36419..51953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003514539.5 → XP_003514587.1  zinc finger protein ubi-d4

    See identical proteins and their annotated locations for XP_003514587.1

    UniProtKB/TrEMBL
    A0A8C2MN04, G3IIW0
    Conserved Domains (3) summary
    cd15530
    Location:329 → 374
    PHD2_d4; PHD finger 2 found in d4 gene family proteins
    cd15691
    Location:272 → 327
    PHD1_DPF2_like; PHD finger 1 found in D4, zinc and double PHD fingers family 2 (DPF2)
    pfam14051
    Location:13 → 79
    Requiem_N; N-terminal domain of DPF2/REQ

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    53431779..53447319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027408542.2 → XP_027264343.1  zinc finger protein ubi-d4

    UniProtKB/TrEMBL
    A0A8C2MN04, G3IIW0
    Related
    ENSCGRP00015019056.2, ENSCGRT00015023497.2
Nucleotide Protein Strain
Heading Accession and Version

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