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LOC100767045 ATP-binding cassette sub-family A member 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767045, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100767045
Gene description
ATP-binding cassette sub-family A member 3
Locus tag
I79_021658
See related
Ensembl:ENSCGRG00015013661
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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Genomic context

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See LOC100767045 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
30
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615602.1 (57638..208427)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (80109777..80264339, complement)

NW_003615602.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615602.1 Reference CriGri_1.0 Primary Assembly

    Range
    57638..208427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007653228.3 → XP_007651418.1  LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MKR0
    Conserved Domains (4) summary
    cd03263
    Location:518 → 738
    ABC_subfamily_A; ATP-binding cassette domain of the lipid transporters, subfamily A
    COG1131
    Location:518 → 826
    CcmA; ABC-type multidrug transport system, ATPase component [Defense mechanisms]
    pfam12698
    Location:1006 → 1233
    ABC2_membrane_3; ABC-2 family transporter protein
    cl21474
    Location:249 → 370
    ABC2_membrane; ABC-2 type transporter

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    80109777..80264339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027410319.2 → XP_027266120.1  LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MKR0, A0A9J7FTI9
    Related
    ENSCGRP00015017896.1, ENSCGRT00015021997.2
Nucleotide Protein Strain
Heading Accession and Version

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