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Pum3 pumilio RNA binding family member 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764311, updated on 8-Mar-2024

Summary

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Gene symbol
Pum3
Gene description
pumilio RNA binding family member 3
Locus tag
I79_022902
See related
Ensembl:ENSCGRG00015000127
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Kiaa0020
Orthologs
human mouse all
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Genomic context

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See Pum3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616157.1 (87117..118087)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (34000286..34031241)

NW_003616157.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene uncharacterized LOC113831375

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pumilio homolog 3
Names
Pumilio domain-containing protein KIAA0020-like
putative pumilio domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616157.1 Reference CriGri_1.0 Primary Assembly

    Range
    87117..118087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003513836.4 → XP_003513884.1  pumilio homolog 3 isoform X3

    See identical proteins and their annotated locations for XP_003513884.1

    UniProtKB/TrEMBL
    A0A8C2QJ29, G3IGI5
    Conserved Domains (2) summary
    cl21719
    Location:182 → 387
    Pumilio; Pumilio-family RNA binding domain
    pfam08144
    Location:434 → 571
    CPL; CPL (NUC119) domain

  2. XM_035437527.1 → XP_035293418.1  pumilio homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A9J7GRI4, G3IGI5
    Conserved Domains (2) summary
    pfam08144
    Location:448 → 585
    CPL; CPL (NUC119) domain
    cl29546
    Location:196 → 401
    Pumilio; Pumilio-family RNA binding domain

  3. XM_007654039.4 → XP_007652229.1  pumilio homolog 3 isoform X2

    See identical proteins and their annotated locations for XP_007652229.1

    UniProtKB/TrEMBL
    A0A9J7FKF8, G3IGI5
    Conserved Domains (2) summary
    cl21719
    Location:191 → 396
    Pumilio; Pumilio-family RNA binding domain
    pfam08144
    Location:443 → 580
    CPL; CPL (NUC119) domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    34000286..34031241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027406467.2 → XP_027262268.1  pumilio homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C2QJ29, G3IGI5
    Related
    ENSCGRP00015000101.2, ENSCGRT00015000150.2

  2. XM_035441898.1 → XP_035297789.1  pumilio homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A9J7GRI4, G3IGI5
    Related
    ENSCGRP00015040580.1, ENSCGRT00015083242.1
    Conserved Domains (2) summary
    pfam08144
    Location:448 → 585
    CPL; CPL (NUC119) domain
    cl29546
    Location:196 → 401
    Pumilio; Pumilio-family RNA binding domain

  3. XM_027406466.2 → XP_027262267.1  pumilio homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A9J7FKF8, G3IGI5
    Related
    ENSCGRP00015043393.1, ENSCGRT00015070915.1
Nucleotide Protein Strain
Heading Accession and Version

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