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Wdr54 WD repeat domain 54 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100763337, updated on 8-Mar-2024

Summary

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Gene symbol
Wdr54
Gene description
WD repeat domain 54
Locus tag
I79_019609
See related
Ensembl:ENSCGRG00015014417
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Wdr54 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615037.1 (312634..325363, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (74326486..74339299, complement)

NW_003615037.1Genomic Context describing neighboring genes Neighboring gene INO80 complex subunit B Neighboring gene rhotekin Neighboring gene chromosome 8 C2orf81 homolog Neighboring gene dynactin subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 54

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615037.1 Reference CriGri_1.0 Primary Assembly

    Range
    312634..325363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461643.1 → XP_035317534.1  WD repeat-containing protein 54 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MKL9
    Conserved Domains (2) summary
    COG2319
    Location:131 → 324
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:72 → 123
    7WD40; WD40 repeat [structural motif]

  2. XM_016980035.3 → XP_016835524.1  WD repeat-containing protein 54 isoform X2

    UniProtKB/TrEMBL
    A0A9J7GGQ0
    Conserved Domains (3) summary
    COG2319
    Location:141 → 334
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:82 → 133
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:141 → 290
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_003511139.5 → XP_003511187.2  WD repeat-containing protein 54 isoform X1

    See identical proteins and their annotated locations for XP_003511187.2

    UniProtKB/TrEMBL
    A0A9J7JYV8
    Conserved Domains (3) summary
    COG2319
    Location:146 → 339
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:87 → 138
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:146 → 295
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    74326486..74339299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448794.1 → XP_035304685.1  WD repeat-containing protein 54 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MKL9
    Related
    ENSCGRP00015018707.2, ENSCGRT00015023050.2
    Conserved Domains (2) summary
    COG2319
    Location:131 → 324
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:72 → 123
    7WD40; WD40 repeat [structural motif]

  2. XM_027429412.2 → XP_027285213.1  WD repeat-containing protein 54 isoform X2

    UniProtKB/TrEMBL
    A0A9J7GGQ0
    Related
    ENSCGRP00015055182.1, ENSCGRT00015075587.1

  3. XM_027429411.2 → XP_027285212.1  WD repeat-containing protein 54 isoform X1

    UniProtKB/TrEMBL
    A0A9J7JYV8
Nucleotide Protein Strain
Heading Accession and Version

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