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Taf10 TATA-box binding protein associated factor 10 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760931, updated on 8-Mar-2024

Summary

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Gene symbol
Taf10
Gene description
TATA-box binding protein associated factor 10
See related
Ensembl:ENSCGRG00015042713
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Taf10 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615626.1 (91121..91994)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (93959376..93960661)

NW_003615626.1Genomic Context describing neighboring genes Neighboring gene dachsous cadherin-related 1 Neighboring gene tripeptidyl peptidase 1 Neighboring gene integrin linked kinase Neighboring gene ribosomal RNA processing 8 Neighboring gene dynein heavy chain domain 1 Neighboring gene translocase of inner mitochondrial membrane 10B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables promoter-specific chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10; transcription initiation factor TFIID subunit 10
Names
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
Transcription initiation factor TFIID subunit 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615626.1 Reference CriGri_1.0 Primary Assembly

    Range
    91121..91994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003512863.3 → XP_003512911.2  transcription initiation factor TFIID subunit 10 isoform X1

    See identical proteins and their annotated locations for XP_003512911.2

    UniProtKB/TrEMBL
    G3IDE5
    Conserved Domains (1) summary
    cd07982
    Location:24 → 126
    TAF10; The TATA Binding Protein (TBP) Associated Factor 10

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    93959376..93960661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027404959.2 → XP_027260760.1  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10 isoform X2

    UniProtKB/TrEMBL
    A0A061IGW3, A0A9J7FJ35
    Related
    ENSCGRP00015040006.1, ENSCGRT00015051626.1
Nucleotide Protein Strain
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