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Prp4k pre-mRNA processing factor kinase PRP4K [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759963, updated on 8-Mar-2024

Summary

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Gene symbol
Prp4k
Gene description
pre-mRNA processing factor kinase PRP4K
Locus tag
I79_003071
See related
Ensembl:ENSCGRG00015002590
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Prpf4b
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613650.1 (751616..777017)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (254652781..254685422)

NW_003613650.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 50 member B Neighboring gene 60S ribosomal protein L7-like Neighboring gene uncharacterized LOC103159775 Neighboring gene family with sequence similarity 217 member A Neighboring gene chromosome unknown C6orf201 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PRP4 homolog
Names
Serine/threonine-protein kinase PRP4-like
pre-mRNA processing factor 4B
putative serine/threonine-protein kinase PRP4 like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613650.1 Reference CriGri_1.0 Primary Assembly

    Range
    751616..777017
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035441189.1 → XP_035297080.1  serine/threonine-protein kinase PRP4 homolog isoform X1

    UniProtKB/TrEMBL
    A0A061IAC5, A0A3L7HV37
    Conserved Domains (2) summary
    PHA03307
    Location:187 → 427
    PHA03307; transcriptional regulator ICP4; Provisional
    cd14135
    Location:686 → 1003
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4

RNA

  1. XR_004768853.1 RNA Sequence

  2. XR_004768857.1 RNA Sequence

  3. XR_004768850.1 RNA Sequence

  4. XR_004768856.1 RNA Sequence

  5. XR_004768859.1 RNA Sequence

  6. XR_004768854.1 RNA Sequence

  7. XR_004768851.1 RNA Sequence

  8. XR_004768852.1 RNA Sequence

  9. XR_004768858.1 RNA Sequence

  10. XR_004768855.1 RNA Sequence

  11. XR_004768860.1 RNA Sequence

  12. XR_004768861.1 RNA Sequence

  13. XR_004768862.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    254652781..254685422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027409264.2 → XP_027265065.1  serine/threonine-protein kinase PRP4 homolog isoform X2

    UniProtKB/TrEMBL
    A0A061IAC5, A0A3L7HV37
    Related
    ENSCGRP00015003269.1, ENSCGRT00015004044.2
    Conserved Domains (2) summary
    PHA03307
    Location:187 → 427
    PHA03307; transcriptional regulator ICP4; Provisional
    cd14135
    Location:686 → 1003
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4

RNA

  1. XR_003484079.2 RNA Sequence

  2. XR_003484080.2 RNA Sequence

  3. XR_003484081.2 RNA Sequence

  4. XR_003484065.2 RNA Sequence

  5. XR_003484067.2 RNA Sequence

  6. XR_003484072.2 RNA Sequence

  7. XR_003484064.2 RNA Sequence

  8. XR_003484071.2 RNA Sequence

  9. XR_004769383.1 RNA Sequence

  10. XR_003484066.2 RNA Sequence

  11. XR_003484068.2 RNA Sequence

  12. XR_003484076.2 RNA Sequence

  13. XR_004769381.1 RNA Sequence

  14. XR_004769382.1 RNA Sequence

  15. XR_003484078.2 RNA Sequence

Nucleotide Protein Strain
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