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Depp1 DEPP autophagy regulator 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758614, updated on 8-Mar-2024

Summary

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Gene symbol
Depp1
Gene description
DEPP autophagy regulator 1
See related
Ensembl:ENSCGRG00015005634
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615739.1 (139869..144165, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (28183146..28187769, complement)

NW_003615739.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 72 Neighboring gene Ras association domain family member 4 Neighboring gene N-alpha-acetyltransferase 50-like Neighboring gene zinc finger protein 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein DEPP1
Names
DEPP1 autophagy regulator
Protein DEPP
protein DEPP-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615739.1 Reference CriGri_1.0 Primary Assembly

    Range
    139869..144165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003513113.4 → XP_003513161.1  protein DEPP1

    See identical proteins and their annotated locations for XP_003513161.1

    UniProtKB/TrEMBL
    G3IEA1
    Conserved Domains (1) summary
    pfam15343
    Location:25 → 204
    DEPP; Decidual protein induced by progesterone family

  2. XM_016980894.3 → XP_016836383.1  protein DEPP1

    UniProtKB/TrEMBL
    G3IEA1
    Conserved Domains (1) summary
    pfam15343
    Location:25 → 204
    DEPP; Decidual protein induced by progesterone family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    28183146..28187769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027429223.2 → XP_027285024.1  protein DEPP1

    UniProtKB/TrEMBL
    A0A9J7JYS0

  2. XM_027429222.2 → XP_027285023.1  protein DEPP1

    UniProtKB/TrEMBL
    A0A9J7JYS0
    Related
    ENSCGRP00015045180.1, ENSCGRT00015078861.1
Nucleotide Protein Strain
Heading Accession and Version

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