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Kif16b kinesin family member 16B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758004, updated on 8-Mar-2024

Summary

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Gene symbol
Kif16b
Gene description
kinesin family member 16B
See related
Ensembl:ENSCGRG00015007846
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
29
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614287.1 (501127..766714, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (36016081..36282007)

NW_003614287.1Genomic Context describing neighboring genes Neighboring gene mono-ADP ribosylhydrolase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIF16B
Names
Kinesin-like protein KIF16B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614287.1 Reference CriGri_1.0 Primary Assembly

    Range
    501127..766714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458622.1 → XP_035314513.1  kinesin-like protein KIF16B isoform X2

    UniProtKB/TrEMBL
    A0A8C2QNM2, A0A9J7H3G0
    Conserved Domains (6) summary
    cd06874
    Location:1162 → 1320
    PX_KIF16B_SNX23; The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23
    COG1196
    Location:602 → 909
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:747 → 1073
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated

  2. XM_035458621.1 → XP_035314512.1  kinesin-like protein KIF16B isoform X1

    UniProtKB/TrEMBL
    A0A8C2QNM2, A0A9J7K7K3
    Conserved Domains (6) summary
    cd06874
    Location:1179 → 1337
    PX_KIF16B_SNX23; The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23
    COG1196
    Location:602 → 909
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:747 → 1073
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated

  3. XM_007647310.4 → XP_007645500.1  kinesin-like protein KIF16B isoform X3

    See identical proteins and their annotated locations for XP_007645500.1

    UniProtKB/TrEMBL
    A0A8C2QNM2, G3HTM1
    Conserved Domains (6) summary
    cd06874
    Location:1179 → 1306
    PX_KIF16B_SNX23; The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23
    smart00129
    Location:3 → 365
    KISc; Kinesin motor, catalytic domain. ATPase
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated
    cl02488
    Location:687 → 862
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

  4. XM_035458623.1 → XP_035314514.1  kinesin-like protein KIF16B isoform X4

    UniProtKB/TrEMBL
    A0A8C2QNM2, A0A9J7K010
    Conserved Domains (6) summary
    COG1196
    Location:602 → 909
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:747 → 1073
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated
    cl02563
    Location:1179 → 1233
    PX_domain; The Phox Homology domain, a phosphoinositide binding module

RNA

  1. XR_004774363.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    36016081..36282007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035447150.1 → XP_035303041.1  kinesin-like protein KIF16B isoform X2

    UniProtKB/TrEMBL
    A0A8C2QNM2, A0A9J7H3G0
    Conserved Domains (6) summary
    cd06874
    Location:1162 → 1320
    PX_KIF16B_SNX23; The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23
    COG1196
    Location:602 → 909
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:747 → 1073
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated

  2. XM_035447149.1 → XP_035303040.1  kinesin-like protein KIF16B isoform X1

    UniProtKB/TrEMBL
    A0A8C2QNM2, A0A9J7K7K3
    Related
    ENSCGRP00015011044.1, ENSCGRT00015013552.2
    Conserved Domains (6) summary
    cd06874
    Location:1179 → 1337
    PX_KIF16B_SNX23; The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23
    COG1196
    Location:602 → 909
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:747 → 1073
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated

  3. XM_035447151.1 → XP_035303042.1  kinesin-like protein KIF16B isoform X4

    UniProtKB/TrEMBL
    A0A8C2QNM2, A0A9J7K010
    Conserved Domains (6) summary
    COG1196
    Location:602 → 909
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:747 → 1073
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01365
    Location:2 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam00498
    Location:478 → 543
    FHA; FHA domain
    pfam16183
    Location:364 → 476
    Kinesin_assoc; Kinesin-associated
    cl02563
    Location:1179 → 1233
    PX_domain; The Phox Homology domain, a phosphoinositide binding module

  4. XM_027421647.2 → XP_027277448.1  kinesin-like protein KIF16B isoform X3

    UniProtKB/TrEMBL
    A0A8C2QNM2, G3HTM1
    Related
    ENSCGRP00015011096.2, ENSCGRT00015013611.2

RNA

  1. XR_004770654.1 RNA Sequence

    Related
    ENSCGRT00015013701.2
Nucleotide Protein Strain
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