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Snf8 SNF8 subunit of ESCRT-II [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100753514, updated on 8-Mar-2024

Summary

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Gene symbol
Snf8
Gene description
SNF8 subunit of ESCRT-II
See related
Ensembl:ENSCGRG00015020205
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614015.1 (130148..142796, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (109177459..109190054)

NW_003614015.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit c locus 1 Neighboring gene ubiquitin conjugating enzyme E2 Z Neighboring gene gastric inhibitory polypeptide Neighboring gene insulin like growth factor 2 mRNA binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar-sorting protein SNF8
Names
SNF8, ESCRT-II complex subunit
Vacuolar-sorting protein SNF8
vacuolar-sorting protein SNF8-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614015.1 Reference CriGri_1.0 Primary Assembly

    Range
    130148..142796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016976366.3 → XP_016831855.1  vacuolar-sorting protein SNF8 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QC89

  2. XM_003503939.5 → XP_003503987.1  vacuolar-sorting protein SNF8 isoform X1

    See identical proteins and their annotated locations for XP_003503987.1

    UniProtKB/TrEMBL
    G3HJN4
    Conserved Domains (1) summary
    pfam04157
    Location:6 → 225
    EAP30; EAP30/Vps36 family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    109177459..109190054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027424238.2 → XP_027280039.1  vacuolar-sorting protein SNF8 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QC89
    Related
    ENSCGRP00015026752.1, ENSCGRT00015032758.2

  2. XM_027424237.2 → XP_027280038.1  vacuolar-sorting protein SNF8 isoform X1

    UniProtKB/TrEMBL
    G3HJN4
    Related
    ENSCGRP00015026734.2, ENSCGRT00015032735.2
    Conserved Domains (1) summary
    pfam04157
    Location:6 → 225
    EAP30; EAP30/Vps36 family
Nucleotide Protein Strain
Heading Accession and Version

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