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Urod uroporphyrinogen decarboxylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100753284, updated on 8-Mar-2024

Summary

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Gene symbol
Urod
Gene description
uroporphyrinogen decarboxylase
See related
Ensembl:ENSCGRG00015025148
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Urod in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613647.1 (2536726..2540871, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (35414818..35418963)

NW_003613647.1Genomic Context describing neighboring genes Neighboring gene translationally-controlled tumor protein-like Neighboring gene zinc finger SWIM-type containing 5 Neighboring gene U11 spliceosomal RNA Neighboring gene HECT domain E3 ubiquitin protein ligase 3 Neighboring gene U6 spliceosomal RNA Neighboring gene eukaryotic translation initiation factor 2B subunit gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uroporphyrinogen decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroporphyrinogen decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613647.1 Reference CriGri_1.0 Primary Assembly

    Range
    2536726..2540871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497380.5 → XP_003497428.1  uroporphyrinogen decarboxylase

    See identical proteins and their annotated locations for XP_003497428.1

    UniProtKB/TrEMBL
    G3GYQ9
    Conserved Domains (1) summary
    cd00717
    Location:20 → 359
    URO-D; Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    35414818..35418963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027402587.2 → XP_027258388.1  uroporphyrinogen decarboxylase

    UniProtKB/TrEMBL
    G3GYQ9
    Related
    ENSCGRP00015046074.1, ENSCGRT00015060807.1
Nucleotide Protein Strain
Heading Accession and Version

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