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Rabepk Rab9 effector protein with kelch motifs [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100731384, updated on 3-Apr-2024

Summary

Gene symbol
Rabepk
Gene description
Rab9 effector protein with kelch motifs
See related
Ensembl:ENSCPOG00000026070
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (199710752..199741889)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176392.1 (8946985..8978390, complement)

NW_026947484.1Genomic Context describing neighboring genes Neighboring gene suppressor of cancer cell invasion Neighboring gene U6 snRNA-associated Sm-like protein LSm3 Neighboring gene protein phosphatase 6 catalytic subunit Neighboring gene uncharacterized LOC134470891 Neighboring gene heat shock protein family A (Hsp70) member 5

Genomic regions, transcripts, and products

General protein information

Preferred Names
rab9 effector protein with kelch motifs

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947484.1 Reference mCavPor4.1

    Range
    199710752..199741889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003470775.5XP_003470823.1  rab9 effector protein with kelch motifs

    See identical proteins and their annotated locations for XP_003470823.1

    UniProtKB/TrEMBL
    H0VY93
    Related
    ENSCPOP00000032212.1
    Conserved Domains (3) summary
    sd00038
    Location:139189
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:243283
    Kelch_1; Kelch motif
    pfam13415
    Location:149200
    Kelch_3; Galactose oxidase, central domain
  2. XM_063227544.1XP_063083614.1  rab9 effector protein with kelch motifs

    UniProtKB/TrEMBL
    H0VY93
  3. XM_013153598.3XP_013009052.1  rab9 effector protein with kelch motifs

    See identical proteins and their annotated locations for XP_013009052.1

    UniProtKB/TrEMBL
    H0VY93
    Conserved Domains (3) summary
    sd00038
    Location:139189
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:243283
    Kelch_1; Kelch motif
    pfam13415
    Location:149200
    Kelch_3; Galactose oxidase, central domain
  4. XM_013153597.3XP_013009051.1  rab9 effector protein with kelch motifs

    See identical proteins and their annotated locations for XP_013009051.1

    UniProtKB/TrEMBL
    H0VY93
    Related
    ENSCPOP00000015675.1
    Conserved Domains (3) summary
    sd00038
    Location:139189
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:243283
    Kelch_1; Kelch motif
    pfam13415
    Location:149200
    Kelch_3; Galactose oxidase, central domain
  5. XM_013153600.3XP_013009054.1  rab9 effector protein with kelch motifs

    See identical proteins and their annotated locations for XP_013009054.1

    UniProtKB/TrEMBL
    H0VY93
    Conserved Domains (3) summary
    sd00038
    Location:139189
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:243283
    Kelch_1; Kelch motif
    pfam13415
    Location:149200
    Kelch_3; Galactose oxidase, central domain