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Cfap46 cilia and flagella associated protein 46 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100728487, updated on 8-Mar-2024

Summary

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Gene symbol
Cfap46
Gene description
cilia and flagella associated protein 46
See related
Ensembl:ENSCPOG00000008507
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Ttc40
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
59
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947485.1 (105576040..105683062, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176418.1 (35273067..35383310)

NW_026947485.1Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate-5-phosphatase A Neighboring gene RING finger protein 141-like Neighboring gene NK6 homeobox 2 Neighboring gene large ribosomal subunit protein uL16-like Neighboring gene small nucleolar RNA SNORA70

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium movement involved in cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 46
Names
tetratricopeptide repeat domain 40

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947485.1 Reference mCavPor4.1

    Range
    105576040..105683062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023561447.2 → XP_023417215.2  cilia- and flagella-associated protein 46 isoform X1

  2. XM_023561446.2 → XP_023417214.2  cilia- and flagella-associated protein 46 isoform X3

  3. XM_063245016.1 → XP_063101086.1  cilia- and flagella-associated protein 46 isoform X2

RNA

  1. XR_010046289.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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