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Zbtb43 zinc finger and BTB domain containing 43 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100727951, updated on 8-Mar-2024

Summary

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Gene symbol
Zbtb43
Gene description
zinc finger and BTB domain containing 43
See related
Ensembl:ENSCPOG00000038507
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (201092085..201111686)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176392.1 (7577179..7597213, complement)

NW_026947484.1Genomic Context describing neighboring genes Neighboring gene LIM homeobox transcription factor 1 beta Neighboring gene uncharacterized LOC134474272 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene uncharacterized LOC134470929

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947484.1 Reference mCavPor4.1

    Range
    201092085..201111686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003470630.5 → XP_003470678.2  zinc finger and BTB domain-containing protein 43 isoform X3

    See identical proteins and their annotated locations for XP_003470678.2

    UniProtKB/TrEMBL
    A0A286Y0K2
    Conserved Domains (3) summary
    sd00017
    Location:376 → 394
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 123
    BTB; BTB/POZ domain
    pfam13465
    Location:414 → 437
    zf-H2C2_2; Zinc-finger double domain

  2. XM_063227704.1 → XP_063083774.1  zinc finger and BTB domain-containing protein 43 isoform X1

  3. XM_013153593.3 → XP_013009047.1  zinc finger and BTB domain-containing protein 43 isoform X2

    UniProtKB/TrEMBL
    A0A286Y0K2
    Conserved Domains (4) summary
    smart00225
    Location:73 → 165
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:415 → 433
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:62 → 162
    BTB; BTB/POZ domain
    pfam13465
    Location:453 → 476
    zf-H2C2_2; Zinc-finger double domain

  4. XM_063227718.1 → XP_063083788.1  zinc finger and BTB domain-containing protein 43 isoform X3

  5. XM_013153594.3 → XP_013009048.1  zinc finger and BTB domain-containing protein 43 isoform X3

    See identical proteins and their annotated locations for XP_013009048.1

    UniProtKB/TrEMBL
    A0A286Y0K2
    Related
    ENSCPOP00000031095.1
    Conserved Domains (3) summary
    sd00017
    Location:376 → 394
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 123
    BTB; BTB/POZ domain
    pfam13465
    Location:414 → 437
    zf-H2C2_2; Zinc-finger double domain

  6. XM_023565465.2 → XP_023421233.1  zinc finger and BTB domain-containing protein 43 isoform X3

    UniProtKB/TrEMBL
    A0A286Y0K2
    Conserved Domains (3) summary
    sd00017
    Location:376 → 394
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 123
    BTB; BTB/POZ domain
    pfam13465
    Location:414 → 437
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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