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Pals1 protein associated with LIN7 1, MAGUK p55 family member [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100715808, updated on 8-Mar-2024

Summary

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Gene symbol
Pals1
Gene description
protein associated with LIN7 1, MAGUK p55 family member
See related
Ensembl:ENSCPOG00000003303
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Mpp5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947514.1 (34211667..34282545, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176399.1 (11980770..12062775)

NW_026947514.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2 subunit alpha Neighboring gene ATPase H+ transporting V1 subunit D Neighboring gene U6atac minor spliceosomal RNA Neighboring gene small nucleolar RNA SNORA44 Neighboring gene golgi associated RAB2 interactor family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of polarity of embryonic epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in generation of neurons IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelial sheet IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein PALS1
Names
membrane palmitoylated protein 5
protein associated with LIN7 1, MAGUK family member

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947514.1 Reference mCavPor4.1

    Range
    34211667..34282545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063241482.1 → XP_063097552.1  protein PALS1 isoform X2

  2. XM_063241481.1 → XP_063097551.1  protein PALS1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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