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Ttc3 tetratricopeptide repeat domain 3 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100715382, updated on 8-Mar-2024

Summary

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Gene symbol
Ttc3
Gene description
tetratricopeptide repeat domain 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Ttc3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
48
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947498.1 (5266718..5397172)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176329.1 (5460635..5591095, complement)

NW_026947498.1Genomic Context describing neighboring genes Neighboring gene holocarboxylase synthetase Neighboring gene ripply transcriptional repressor 3 Neighboring gene uncharacterized LOC101789064 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P Neighboring gene uncharacterized LOC106026258 Neighboring gene uncharacterized LOC134470425 Neighboring gene VPS26 endosomal protein sorting factor C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TTC3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947498.1 Reference mCavPor4.1

    Range
    5266718..5397172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063224500.1 → XP_063080570.1  E3 ubiquitin-protein ligase TTC3 isoform X1

  2. XM_063224496.1 → XP_063080566.1  E3 ubiquitin-protein ligase TTC3 isoform X1

  3. XM_063224497.1 → XP_063080567.1  E3 ubiquitin-protein ligase TTC3 isoform X2

  4. XM_063224498.1 → XP_063080568.1  E3 ubiquitin-protein ligase TTC3 isoform X3

  5. XM_063224499.1 → XP_063080569.1  E3 ubiquitin-protein ligase TTC3 isoform X4

  6. XM_063224501.1 → XP_063080571.1  E3 ubiquitin-protein ligase TTC3 isoform X5

Nucleotide Protein
Heading Accession and Version

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