U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fkbpl FKBP prolyl isomerase like [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100712111, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
fkbpl
Gene description
FKBP prolyl isomerase like
See related
Ensembl:ENSONIG00000012284
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in ovary (RPKM 19.3), testis (RPKM 15.9) and 9 other tissues See more
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG20
Exon count:
5
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG20 NC_031984.2 (18701656..18704743, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG20 NC_031984.1 (26290912..26294005)

Linkage Group LG20 - NC_031984.2Genomic Context describing neighboring genes Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene EBP cholestenol delta-isomerase Neighboring gene protein Wnt-2b-A Neighboring gene putative helicase mov-10-B.2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FK506-binding protein-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031984.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    18701656..18704743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003448264.5 → XP_003448312.1  FK506-binding protein-like isoform X2

    UniProtKB/TrEMBL
    A0A669CTV7, I3K2X6
    Related
    ENSONIP00000015471.2, ENSONIT00000015484.2
    Conserved Domains (3) summary
    sd00006
    Location:276 → 306
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:311 → 343
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:276 → 342
    TPR_11; TPR repeat

  2. XM_013273124.3 → XP_013128578.1  FK506-binding protein-like isoform X3

    UniProtKB/TrEMBL
    A0A669CTV7
    Conserved Domains (3) summary
    sd00006
    Location:254 → 284
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:289 → 321
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:254 → 320
    TPR_11; TPR repeat

  3. XM_013273123.3 → XP_013128577.1  FK506-binding protein-like isoform X1

    UniProtKB/TrEMBL
    A0A669CTV7
    Conserved Domains (3) summary
    sd00006
    Location:281 → 311
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:316 → 348
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:281 → 347
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.