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dnajc10 DnaJ (Hsp40) homolog, subfamily C, member 10 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100711043, updated on 8-Mar-2024

Summary

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Gene symbol
dnajc10
Gene description
DnaJ (Hsp40) homolog, subfamily C, member 10
See related
Ensembl:ENSONIG00000016244
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in testis (RPKM 13.3), eye (RPKM 7.1) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG16
Exon count:
25
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG16 NC_031987.2 (30636751..30651378, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG16 NC_031987.1 (5378218..5392951)

Linkage Group LG16 - NC_031987.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109197502 Neighboring gene dual specificity phosphatase 19 Neighboring gene frizzled related protein Neighboring gene uncharacterized LOC112844133 Neighboring gene nucleoporin 35 Neighboring gene DEAD-box helicase 3 X-linked a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
dnaJ homolog subfamily C member 10
Names
DnaJ heat shock protein family (Hsp40) member C10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031987.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    30636751..30651378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013274023.3 → XP_013129477.1  dnaJ homolog subfamily C member 10

    UniProtKB/TrEMBL
    A0A669DQ82, I3KH56
    Related
    ENSONIP00000020451.1, ENSONIT00000020469.2
    Conserved Domains (4) summary
    COG0484
    Location:36 → 164
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    cd03003
    Location:131 → 231
    PDI_a_ERdj5_N; PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the ...
    cd03004
    Location:555 → 663
    PDI_a_ERdj5_C; PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is composed of the three TRX domains located at the C-terminal ...
    TIGR01130
    Location:132 → 549
    ER_PDI_fam; protein disulfide isomerase, eukaryotic
Nucleotide Protein
Heading Accession and Version

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