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cdkn1bb cyclin dependent kinase inhibitor 1Bb [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100709597, updated on 8-Mar-2024

Summary

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Gene symbol
cdkn1bb
Gene description
cyclin dependent kinase inhibitor 1Bb
See related
Ensembl:ENSONIG00000008829
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
cdkn1b
Expression
Ubiquitous expression in eye (RPKM 5.9), testis (RPKM 3.3) and 8 other tissues See more
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG7
Exon count:
3
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (46459255..46463441)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (52156259..52158828, complement)

Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator-activated receptor alpha b Neighboring gene tyrosyl-tRNA synthetase 2, mitochondrial Neighboring gene potassium voltage-gated channel, KQT-like subfamily, member 1.2 Neighboring gene mitochondrial ribosomal protein S35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase inhibitor 1B
Names
cyclin dependent kinase inhibitor 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    46459255..46463441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003443919.5 → XP_003443967.1  cyclin-dependent kinase inhibitor 1B

    UniProtKB/TrEMBL
    I3JQF9
    Related
    ENSONIP00000011103.1, ENSONIT00000011112.2
    Conserved Domains (1) summary
    pfam02234
    Location:31 → 77
    CDI; Cyclin-dependent kinase inhibitor
Nucleotide Protein
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