U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tc2n tandem C2 domains, nuclear [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100709508, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
tc2n
Gene description
tandem C2 domains, nuclear
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in kidney (RPKM 4.0), skin (RPKM 2.7) and 6 other tissues See more
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG19
Exon count:
12
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG19 NC_031983.2 (22050833..22063337, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG19 NC_031983.1 (8740693..8753594)

Linkage Group LG19 - NC_031983.2Genomic Context describing neighboring genes Neighboring gene pleckstrin 2 Neighboring gene oocyte zinc finger protein XlCOF20 Neighboring gene zinc finger protein OZF-like Neighboring gene fibulin 5 Neighboring gene thyroid hormone receptor interactor 11

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tandem C2 domains nuclear protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031983.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    22050833..22063337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003445421.5 → XP_003445469.1  tandem C2 domains nuclear protein

    UniProtKB/TrEMBL
    A0A669CI11
    Conserved Domains (1) summary
    cl14603
    Location:320 → 453
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.