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gpr176 G protein-coupled receptor 176 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100706820, updated on 8-Mar-2024

Summary

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Gene symbol
gpr176
Gene description
G protein-coupled receptor 176
See related
Ensembl:ENSONIG00000005754
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in brain (RPKM 2.4), eye (RPKM 1.9) and 6 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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See gpr176 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
3
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG15 NC_031980.2 (16097463..16111682)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG15 NC_031980.1 (2948676..2962908, complement)

Linkage Group LG15 - NC_031980.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102082770 Neighboring gene serine and arginine rich splicing factor 5b Neighboring gene sushi domain containing 6 Neighboring gene acyl-coenzyme A thioesterase 1 Neighboring gene thrombospondin 1b Neighboring gene uncharacterized LOC112842499

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-protein coupled receptor 176

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031980.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    16097463..16111682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003446329.5 → XP_003446377.1  G-protein coupled receptor 176

    UniProtKB/TrEMBL
    I3JEG3
    Related
    ENSONIP00000007254.2, ENSONIT00000007259.2
    Conserved Domains (2) summary
    cd14964
    Location:63 → 89
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:63 → 353
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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