U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

osbpl7 oxysterol binding protein-like 7 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100705505, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
osbpl7
Gene description
oxysterol binding protein-like 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Biased expression in ovary (RPKM 31.5), eye (RPKM 13.9) and 1 other tissue See more
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG8
Exon count:
22
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG8 NC_031973.2 (5453984..5471260)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG8 NC_031973.1 (4423945..4441082, complement)

Linkage Group LG8 - NC_031973.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112847650 Neighboring gene pyridoxamine 5'-phosphate oxidase Neighboring gene mitochondrial ribosomal protein L10 Neighboring gene T-box transcription factor 21 Neighboring gene TBK1 binding protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
oxysterol-binding protein-related protein 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031973.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    5453984..5471260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005453763.4 → XP_005453820.1  oxysterol-binding protein-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_005453820.1

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:519 → 861
    Oxysterol_BP; Oxysterol-binding protein

  2. XM_005453764.4 → XP_005453821.1  oxysterol-binding protein-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_005453821.1

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:519 → 861
    Oxysterol_BP; Oxysterol-binding protein

  3. XM_005453766.4 → XP_005453823.1  oxysterol-binding protein-related protein 7 isoform X2

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:516 → 858
    Oxysterol_BP; Oxysterol-binding protein

  4. XM_005453767.4 → XP_005453824.1  oxysterol-binding protein-related protein 7 isoform X3

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:511 → 853
    Oxysterol_BP; Oxysterol-binding protein

  5. XM_005453769.4 → XP_005453826.1  oxysterol-binding protein-related protein 7 isoform X5

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:504 → 846
    Oxysterol_BP; Oxysterol-binding protein

  6. XM_005453768.4 → XP_005453825.1  oxysterol-binding protein-related protein 7 isoform X4

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:508 → 850
    Oxysterol_BP; Oxysterol-binding protein

  7. XM_013273458.3 → XP_013128912.1  oxysterol-binding protein-related protein 7 isoform X7

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:496 → 838
    Oxysterol_BP; Oxysterol-binding protein

  8. XM_003448657.5 → XP_003448705.1  oxysterol-binding protein-related protein 7 isoform X6

    UniProtKB/TrEMBL
    I3KPA4
    Conserved Domains (3) summary
    cd13287
    Location:47 → 174
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam00169
    Location:74 → 164
    PH; PH domain
    pfam01237
    Location:493 → 835
    Oxysterol_BP; Oxysterol-binding protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.