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g3bp1 GTPase activating protein (SH3 domain) binding protein 1 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100692713, updated on 8-Mar-2024

Summary

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Gene symbol
g3bp1
Gene description
GTPase activating protein (SH3 domain) binding protein 1
See related
Ensembl:ENSONIG00000004263
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in ovary (RPKM 66.9), testis (RPKM 53.5) and 8 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
12
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG2 NC_031966.2 (6429683..6439447)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG2 NC_031966.1 (6331299..6341167)

Linkage Group LG2 - NC_031966.2Genomic Context describing neighboring genes Neighboring gene melatonin receptor type 1A like Neighboring gene FAT atypical cadherin 2 Neighboring gene uncharacterized LOC102077793 Neighboring gene uncharacterized LOC102078058 Neighboring gene glycine receptor, alpha 1 Neighboring gene uncharacterized LOC102078206

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ras GTPase-activating protein-binding protein 1
Names
G3BP stress granule assembly factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031966.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    6429683..6439447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005453218.4 → XP_005453275.2  LOW QUALITY PROTEIN: ras GTPase-activating protein-binding protein 1

    UniProtKB/TrEMBL
    A0A669CJW3
    Related
    ENSONIP00000005367.2, ENSONIT00000005371.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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