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cdk19 cyclin-dependent kinase 19 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100691935, updated on 8-Mar-2024

Summary

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Gene symbol
cdk19
Gene description
cyclin-dependent kinase 19
See related
Ensembl:ENSONIG00000011391
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in brain (RPKM 3.4), eye (RPKM 3.0) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG15
Exon count:
15
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG15 NC_031980.2 (31098857..31154658)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG15 NC_031980.1 (17006834..17060806)

Linkage Group LG15 - NC_031980.2Genomic Context describing neighboring genes Neighboring gene ribosome production factor 2 homolog Neighboring gene adenosylmethionine decarboxylase 1 Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 2 Neighboring gene zinc finger CCCH-type containing 12D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031980.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    31098857..31154658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019345608.2 → XP_019201153.1  cyclin-dependent kinase 19

    UniProtKB/TrEMBL
    A0A669CBU0, I3JZP2
    Related
    ENSONIP00000014337.1, ENSONIT00000014348.2
    Conserved Domains (1) summary
    cd07867
    Location:18 → 335
    STKc_CDC2L6; Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

RNA

  1. XR_002056534.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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