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anp32b acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100691826, updated on 8-Mar-2024

Summary

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Gene symbol
anp32b
Gene description
acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in skin (RPKM 40.8), blood (RPKM 38.7) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG6
Exon count:
7
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG6 NC_031971.2 (17391841..17398302, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG6 NC_031971.1 (23494812..23501152)

Linkage Group LG6 - NC_031971.2Genomic Context describing neighboring genes Neighboring gene USO1 vesicle transport factor Neighboring gene coronin 2Aa Neighboring gene hemogen Neighboring gene tRNA methyltransferase O

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acidic leucine-rich nuclear phosphoprotein 32 family member B
Names
acidic nuclear phosphoprotein 32 family member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031971.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    17391841..17398302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003452263.5 → XP_003452311.1  acidic leucine-rich nuclear phosphoprotein 32 family member B

    Conserved Domains (2) summary
    sd00035
    Location:90 → 114
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam14580
    Location:73 → 146
    LRR_9; Leucine-rich repeat
Nucleotide Protein
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