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mfsd8 major facilitator superfamily domain containing 8 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100689769, updated on 8-Mar-2024

Summary

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Gene symbol
mfsd8
Gene description
major facilitator superfamily domain containing 8
See related
Ensembl:ENSONIG00000007537
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in ovary (RPKM 64.2), testis (RPKM 13.6) and 8 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG3
Exon count:
12
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG3 NC_031967.2 (14421470..14430326, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG3b NC_031968.1 (2720913..2729788, complement)

Linkage Group LG3 - NC_031967.2Genomic Context describing neighboring genes Neighboring gene zeta-sarcoglycan Neighboring gene tetratricopeptide repeat protein 31 Neighboring gene butyrophilin subfamily 1 member A1 Neighboring gene uncharacterized LOC102080699

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major facilitator superfamily domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031967.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    14421470..14430326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003450331.5 → XP_003450379.1  major facilitator superfamily domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    I3JKW1
    Conserved Domains (1) summary
    cd17326
    Location:35 → 497
    MFS_MFSD8; Major facilitator superfamily domain-containing protein 8

  2. XM_005468255.4 → XP_005468312.1  major facilitator superfamily domain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    I3JKW1
    Related
    ENSONIP00000009505.2, ENSONIT00000009511.2
    Conserved Domains (1) summary
    cd17326
    Location:34 → 496
    MFS_MFSD8; Major facilitator superfamily domain-containing protein 8
Nucleotide Protein
Heading Accession and Version

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