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CKAP5 cytoskeleton associated protein 5 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100675479, updated on 11-Apr-2024

Summary

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Gene symbol
CKAP5
Gene description
cytoskeleton associated protein 5
See related
EnsemblRapid:ENSLAFG00000010386
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
45
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 7 NC_087348.1 (36188149..36301400)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573441.1 (2636436..2749976)

Chromosome 7 - NC_087348.1Genomic Context describing neighboring genes Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene LDL receptor related protein 4 Neighboring gene small nucleolar RNA SNORD67 Neighboring gene small nucleolar RNA SNORD67 Neighboring gene Rho GTPase activating protein 1 Neighboring gene zinc finger protein 408 Neighboring gene coagulation factor II, thrombin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus end polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centrosome duplication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of microtubule cytoskeleton polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoskeleton-associated protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087348.1 Reference mLoxAfr1.hap2

    Range
    36188149..36301400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003412252.4 → XP_003412300.2  cytoskeleton-associated protein 5 isoform X1

    Related
    ENSLAFP00000018091.2, ENSLAFT00000032283.2

  2. XM_010592087.3 → XP_010590389.2  cytoskeleton-associated protein 5 isoform X2

  3. XM_064288188.1 → XP_064144258.1  cytoskeleton-associated protein 5 isoform X3

    Related
    ENSLAFP00000035353.1, ENSLAFT00000041876.1

  4. XM_064288187.1 → XP_064144257.1  cytoskeleton-associated protein 5 isoform X1

Nucleotide Protein
Heading Accession and Version

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