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CLPB ClpB family mitochondrial disaggregase [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100673715, updated on 11-Apr-2024

Summary

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Gene symbol
CLPB
Gene description
ClpB family mitochondrial disaggregase
See related
EnsemblRapid:ENSLAFG00000011447
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 7 NC_087348.1 (87289445..87464080, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573499.1 (7340192..7509771)

Chromosome 7 - NC_087348.1Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate phosphatase like 1 Neighboring gene paired like homeobox 2A Neighboring gene spermine oxidase-like Neighboring gene phosphodiesterase 2A Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial disaggregase
Names
ClpB homolog, mitochondrial AAA ATPase chaperonin
caseinolytic mitochondrial matrix peptidase chaperone subunit B
caseinolytic peptidase B protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087348.1 Reference mLoxAfr1.hap2

    Range
    87289445..87464080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023538993.2 → XP_023394761.2  mitochondrial disaggregase isoform X2

    Related
    ENSLAFP00000009564.4, ENSLAFT00000011450.4

  2. XM_010599603.3 → XP_010597905.3  mitochondrial disaggregase isoform X1

    Related
    ENSLAFP00000022328.2, ENSLAFT00000026705.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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