U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PHETA1 PH domain containing endocytic trafficking adaptor 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100672472, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
PHETA1
Gene description
PH domain containing endocytic trafficking adaptor 1
See related
EnsemblRapid:ENSLAFG00000041513
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Also known as
FAM109A
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 19 NC_087360.1 (9701901..9709950, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573504.1 (5919822..5927820, complement)

Chromosome 19 - NC_087360.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene cut like homeobox 2 Neighboring gene SH2B adaptor protein 3 Neighboring gene ataxin 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sesquipedalian-1
Names
family with sequence similarity 109 member A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087360.1 Reference mLoxAfr1.hap2

    Range
    9701901..9709950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010599879.2 → XP_010598181.1  sesquipedalian-1

    UniProtKB/TrEMBL
    G3UD02
    Related
    ENSLAFP00000034268.1, ENSLAFT00000046284.1
    Conserved Domains (2) summary
    cd13288
    Location:11 → 129
    PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
    pfam00169
    Location:22 → 111
    PH; PH domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.