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PRNP prion protein (Kanno blood group) [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100671000, updated on 11-Apr-2024

Summary

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Gene symbol
PRNP
Gene description
prion protein (Kanno blood group)
See related
EnsemblRapid:ENSLAFG00000037033
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 24 NC_087365.1 (25439375..25455640, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573439.1 (25372003..25386723, complement)

Chromosome 24 - NC_087365.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein HaeIII subfamily 1-like Neighboring gene Ras association domain family member 2 Neighboring gene prion like protein doppel Neighboring gene casein kinase II subunit alpha'-like Neighboring gene adrenoceptor alpha 1D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major prion protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087365.1 Reference mLoxAfr1.hap2

    Range
    25439375..25455640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023550043.2 → XP_023405811.1  major prion protein

    UniProtKB/TrEMBL
    B2LVH3, G3SMG5
    Related
    ENSLAFP00000031221.1, ENSLAFT00000057231.1
    Conserved Domains (2) summary
    smart00157
    Location:25 → 243
    PRP; Major prion protein
    pfam11587
    Location:1 → 30
    Prion_bPrPp; Major prion protein bPrPp - N terminal

  2. XM_010591542.3 → XP_010589844.1  major prion protein

    See identical proteins and their annotated locations for XP_010589844.1

    UniProtKB/TrEMBL
    B2LVH3, G3SMG5
    Related
    ENSLAFP00000039116.1, ENSLAFT00000061305.1
    Conserved Domains (2) summary
    smart00157
    Location:25 → 243
    PRP; Major prion protein
    pfam11587
    Location:1 → 30
    Prion_bPrPp; Major prion protein bPrPp - N terminal

  3. XM_010591543.3 → XP_010589845.1  major prion protein

    See identical proteins and their annotated locations for XP_010589845.1

    UniProtKB/TrEMBL
    B2LVH3, G3SMG5
    Related
    ENSLAFP00000029607.1, ENSLAFT00000042461.1
    Conserved Domains (2) summary
    smart00157
    Location:25 → 243
    PRP; Major prion protein
    pfam11587
    Location:1 → 30
    Prion_bPrPp; Major prion protein bPrPp - N terminal
Nucleotide Protein
Heading Accession and Version

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