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DDX59 DEAD-box helicase 59 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100669379, updated on 11-Apr-2024

Summary

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Gene symbol
DDX59
Gene description
DEAD-box helicase 59
See related
EnsemblRapid:ENSLAFG00000030362
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See DDX59 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 20 NC_087361.1 (74872273..74920994)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573433.1 (4458639..4491800, complement)

Chromosome 20 - NC_087361.1Genomic Context describing neighboring genes Neighboring gene calmodulin regulated spectrin associated protein family member 2 Neighboring gene tetratricopeptide repeat protein 12-like Neighboring gene basic proline-rich protein-like Neighboring gene kinesin family member 14 Neighboring gene zinc finger protein 281

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX59

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087361.1 Reference mLoxAfr1.hap2

    Range
    74872273..74920994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064273430.1 → XP_064129500.1  probable ATP-dependent RNA helicase DDX59

  2. XM_064273429.1 → XP_064129499.1  probable ATP-dependent RNA helicase DDX59

    Related
    ENSLAFP00000021011.2, ENSLAFT00000026872.2

  3. XM_003410205.4 → XP_003410253.1  probable ATP-dependent RNA helicase DDX59

    Conserved Domains (4) summary
    PLN00206
    Location:80 → 591
    PLN00206; DEAD-box ATP-dependent RNA helicase; Provisional
    cd00079
    Location:416 → 548
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd00268
    Location:205 → 406
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam04438
    Location:105 → 132
    zf-HIT; HIT zinc finger
Nucleotide Protein
Heading Accession and Version

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