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SLC4A4 solute carrier family 4 member 4 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100667036, updated on 11-Apr-2024

Summary

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Gene symbol
SLC4A4
Gene description
solute carrier family 4 member 4
See related
EnsemblRapid:ENSLAFG00000012592
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 5 NC_087346.1 (83685392..84078216, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573450.1 (26413423..26755379, complement)

Chromosome 5 - NC_087346.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene neuropeptide FF receptor 2 Neighboring gene GC vitamin D binding protein Neighboring gene U6 spliceosomal RNA Neighboring gene deoxycytidine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:bicarbonate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables solute:inorganic anion antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicarbonate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
electrogenic sodium bicarbonate cotransporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087346.1 Reference mLoxAfr1.hap2

    Range
    83685392..84078216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064285722.1 → XP_064141792.1  electrogenic sodium bicarbonate cotransporter 1 isoform X3

    Related
    ENSLAFP00000040597.1, ENSLAFT00000042209.1

  2. XM_064285721.1 → XP_064141791.1  electrogenic sodium bicarbonate cotransporter 1 isoform X2

    Related
    ENSLAFP00000010531.4, ENSLAFT00000012595.4

  3. XM_064285720.1 → XP_064141790.1  electrogenic sodium bicarbonate cotransporter 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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