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CCDC136 coiled-coil domain containing 136 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100665676, updated on 11-Apr-2024

Summary

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Gene symbol
CCDC136
Gene description
coiled-coil domain containing 136
See related
EnsemblRapid:ENSLAFG00000003804
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 8 NC_087349.1 (20945043..20971822, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573425.1 (98307198..98334161)

Chromosome 8 - NC_087349.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V1 subunit F Neighboring gene filamin C Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene opsin 1, short wave sensitive

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in acrosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 136

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087349.1 Reference mLoxAfr1.hap2

    Range
    20945043..20971822 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010587398.3 → XP_010585700.1  coiled-coil domain-containing protein 136

    UniProtKB/TrEMBL
    G3ST41
    Related
    ENSLAFP00000003179.4, ENSLAFT00000003807.4
    Conserved Domains (3) summary
    COG1196
    Location:84 → 520
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:351 → 982
    COG5022; Myosin heavy chain [General function prediction only]
    TIGR02168
    Location:884 → 1075
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

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