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ZNF821 zinc finger protein 821 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100665249, updated on 11-Apr-2024

Summary

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Gene symbol
ZNF821
Gene description
zinc finger protein 821
See related
EnsemblRapid:ENSLAFG00000016315
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 21 NC_087362.1 (45412054..45450511, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573468.1 (13556843..13588691)

Chromosome 21 - NC_087362.1Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein 3-like Neighboring gene PH domain and leucine rich repeat protein phosphatase 2 Neighboring gene small nucleolar RNA SNORD71 Neighboring gene adaptor related protein complex 1 subunit gamma 1 Neighboring gene ataxin 1 like Neighboring gene IST1 factor associated with ESCRT-III Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting Neighboring gene dihydroorotate dehydrogenase (quinone)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 821

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087362.1 Reference mLoxAfr1.hap2

    Range
    45412054..45450511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023556652.2 → XP_023412420.1  zinc finger protein 821 isoform X1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  2. XM_064273826.1 → XP_064129896.1  zinc finger protein 821 isoform X1

  3. XM_064273821.1 → XP_064129891.1  zinc finger protein 821 isoform X1

  4. XM_064273822.1 → XP_064129892.1  zinc finger protein 821 isoform X1

  5. XM_010596790.3 → XP_010595092.1  zinc finger protein 821 isoform X1

    See identical proteins and their annotated locations for XP_010595092.1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  6. XM_023556651.2 → XP_023412419.1  zinc finger protein 821 isoform X1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  7. XM_064273824.1 → XP_064129894.1  zinc finger protein 821 isoform X1

  8. XM_064273819.1 → XP_064129889.1  zinc finger protein 821 isoform X1

  9. XM_064273818.1 → XP_064129888.1  zinc finger protein 821 isoform X1

  10. XM_064273827.1 → XP_064129897.1  zinc finger protein 821 isoform X2

    Related
    ENSLAFP00000013698.4, ENSLAFT00000016313.4

  11. XM_003417060.4 → XP_003417108.1  zinc finger protein 821 isoform X1

    See identical proteins and their annotated locations for XP_003417108.1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  12. XM_023556649.2 → XP_023412417.1  zinc finger protein 821 isoform X1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  13. XM_023556648.2 → XP_023412416.1  zinc finger protein 821 isoform X1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  14. XM_064273825.1 → XP_064129895.1  zinc finger protein 821 isoform X1

  15. XM_064273817.1 → XP_064129887.1  zinc finger protein 821 isoform X1

  16. XM_064273823.1 → XP_064129893.1  zinc finger protein 821 isoform X1

  17. XM_023556647.2 → XP_023412415.1  zinc finger protein 821 isoform X1

    UniProtKB/TrEMBL
    G3TGS2
    Related
    ENSLAFP00000042198.1, ENSLAFT00000052195.1
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  18. XM_064273816.1 → XP_064129886.1  zinc finger protein 821 isoform X1

  19. XM_023556643.2 → XP_023412411.1  zinc finger protein 821 isoform X1

    UniProtKB/TrEMBL
    G3TGS2
    Conserved Domains (2) summary
    sd00017
    Location:120 → 140
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:274 → 386
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  20. XM_064273820.1 → XP_064129890.1  zinc finger protein 821 isoform X1

  21. XM_064273828.1 → XP_064129898.1  zinc finger protein 821 isoform X4

  22. XM_023556654.2 → XP_023412422.1  zinc finger protein 821 isoform X3

    Conserved Domains (2) summary
    sd00017
    Location:40 → 60
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25887
    Location:194 → 306
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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