U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CLK1 CDC like kinase 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100664713, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
CLK1
Gene description
CDC like kinase 1
See related
EnsemblRapid:ENSLAFG00000009891
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 6 NC_087347.1 (45264668..45277148)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573423.1 (25928963..25940074)

Chromosome 6 - NC_087347.1Genomic Context describing neighboring genes Neighboring gene origin recognition complex subunit 2 Neighboring gene NGG1 interacting factor 3 like 1 Neighboring gene peptidylprolyl isomerase like 3 Neighboring gene basic leucine zipper and W2 domains 1 Neighboring gene aldehyde oxidase 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dual specificity protein kinase CLK1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087347.1 Reference mLoxAfr1.hap2

    Range
    45264668..45277148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010602548.3 → XP_010600850.1  dual specificity protein kinase CLK1 isoform X1

    UniProtKB/TrEMBL
    G3T4J6
    Related
    ENSLAFP00000008288.3, ENSLAFT00000009890.4
    Conserved Domains (2) summary
    smart00220
    Location:161 → 477
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14213
    Location:148 → 477
    PKc_CLK1_4; Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4

  2. XM_064286833.1 → XP_064142903.1  dual specificity protein kinase CLK1 isoform X2

  3. XM_010602549.3 → XP_010600851.1  dual specificity protein kinase CLK1 isoform X3

    Related
    ENSLAFP00000042331.1, ENSLAFT00000051812.1
    Conserved Domains (2) summary
    smart00220
    Location:43 → 358
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14213
    Location:41 → 358
    PKc_CLK1_4; Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4

  4. XM_064286834.1 → XP_064142904.1  dual specificity protein kinase CLK1 isoform X4

  5. XM_064286835.1 → XP_064142905.1  dual specificity protein kinase CLK1 isoform X5

RNA

  1. XR_010322255.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.