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SMC4 structural maintenance of chromosomes 4 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100664569, updated on 11-Apr-2024

Summary

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Gene symbol
SMC4
Gene description
structural maintenance of chromosomes 4
See related
EnsemblRapid:ENSLAFG00000017104
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 23 NC_087364.1 (77211185..77247401)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573461.1 (284045..318188, complement)

Chromosome 23 - NC_087364.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111752285 Neighboring gene interleukin 12A Neighboring gene chromosome 23 C3orf80 homolog Neighboring gene intraflagellar transport 80 Neighboring gene tripartite motif containing 59 Neighboring gene small Cajal body-specific RNA 7 Neighboring gene karyopherin subunit alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic chromosome condensation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of condensin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structural maintenance of chromosomes protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087364.1 Reference mLoxAfr1.hap2

    Range
    77211185..77247401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064275660.1 → XP_064131730.1  structural maintenance of chromosomes protein 4 isoform X1

    Related
    ENSLAFP00000014342.4, ENSLAFT00000017107.4

  2. XM_064275661.1 → XP_064131731.1  structural maintenance of chromosomes protein 4 isoform X2

Nucleotide Protein
Heading Accession and Version

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