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GYS1 glycogen synthase 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100659799, updated on 11-Apr-2024

Summary

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Gene symbol
GYS1
Gene description
glycogen synthase 1
See related
EnsemblRapid:ENSLAFG00000007245
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See GYS1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 11 NC_087352.1 (16683515..16707918)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573424.1 (8835990..8855980)

Chromosome 11 - NC_087352.1Genomic Context describing neighboring genes Neighboring gene RuvB like AAA ATPase 2 Neighboring gene luteinizing hormone subunit beta Neighboring gene ferritin light chain Neighboring gene BCL2 associated X, apoptosis regulator Neighboring gene dihydrodiol dehydrogenase Neighboring gene nucleobindin 1 Neighboring gene TUB like protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen (starch) synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087352.1 Reference mLoxAfr1.hap2

    Range
    16683515..16707918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010586515.3 → XP_010584817.1  glycogen [starch] synthase, muscle isoform X2

    Conserved Domains (1) summary
    cd03793
    Location:20 → 535
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...

  2. XM_023543257.2 → XP_023399025.1  glycogen [starch] synthase, muscle isoform X3

    Conserved Domains (1) summary
    pfam05693
    Location:83 → 581
    Glycogen_syn; Glycogen synthase

  3. XM_003406819.4 → XP_003406867.1  glycogen [starch] synthase, muscle isoform X1

    UniProtKB/TrEMBL
    G3SZN0
    Related
    ENSLAFP00000006093.3, ENSLAFT00000007246.4
    Conserved Domains (2) summary
    cd03793
    Location:26 → 615
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...
    pfam05693
    Location:31 → 663
    Glycogen_syn; Glycogen synthase
Nucleotide Protein
Heading Accession and Version

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