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CCL28 C-C motif chemokine ligand 28 [ Equus caballus (horse) ]

Gene ID: 100629419, updated on 8-Mar-2024

Summary

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Official Symbol
CCL28provided by VGNC
Official Full Name
C-C motif chemokine ligand 28provided by VGNC
Primary source
VGNC:VGNC:58142
See related
Ensembl:ENSECAG00000008624
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
5
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 21 NC_009164.3 (23921133..23958214)
102 previous assembly EquCab2.0 (GCF_000002305.2) 21 NC_009164.2 (23208689..23245585)

Chromosome 21 - NC_009164.3Genomic Context describing neighboring genes Neighboring gene chromosome 21 C5orf34 homolog Neighboring gene transmembrane protein 267 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA synthase 1 Neighboring gene NIM1 serine/threonine protein kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-C motif chemokine 28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009164.3 Reference EquCab3.0 Primary Assembly

    Range
    23921133..23958214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023625685.1 → XP_023481453.1  C-C motif chemokine 28

    UniProtKB/TrEMBL
    F6VWX6
    Conserved Domains (1) summary
    pfam00048
    Location:30 → 88
    IL8; Small cytokines (intecrine/chemokine), interleukin-8 like

  2. XM_005604289.3 → XP_005604346.1  C-C motif chemokine 28

    See identical proteins and their annotated locations for XP_005604346.1

    UniProtKB/TrEMBL
    F6VWX6
    Related
    ENSECAP00000006560.2, ENSECAT00000008721.4
    Conserved Domains (1) summary
    pfam00048
    Location:30 → 88
    IL8; Small cytokines (intecrine/chemokine), interleukin-8 like
Nucleotide Protein
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