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Mir316 microRNA mir-316 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 100628376, updated on 23-Apr-2024

Summary

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Gene symbol
Mir316
Gene description
microRNA mir-316
See related
miRBase:MI0016305
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Also known as
tca-mir-316
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (36384210..36384298, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (998656..998744)

Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized LOC135265245 Neighboring gene huntingtin-interacting protein K Neighboring gene cytochrome c oxidase subunit 6B2 Neighboring gene mitochondrial ribosomal protein L42 Neighboring gene protein TMEPAI Neighboring gene uncharacterized LOC135266416 Neighboring gene uncharacterized LOC103312244

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional shifts in insect microRNA evolution. Marco A, et al. Genome Biol Evol, 2010. PMID 20817720, Free PMC Article
  2. miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381832, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • microRNA 316

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038665.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    JANKOB010000001

RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

    Range
    36384210..36384298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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