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PDP2 pyruvate dehydrogenase phosphatase catalytic subunit 2 [ Sus scrofa (pig) ]

Gene ID: 100623511, updated on 8-Mar-2024

Summary

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Official Symbol
PDP2provided by VGNC
Official Full Name
pyruvate dehydrogenase phosphatase catalytic subunit 2provided by VGNC
Primary source
VGNC:VGNC:91287
See related
Ensembl:ENSSSCG00000036067
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in subcutaneous adipose (RPKM 9.4), kidney (RPKM 7.1) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (27565423..27572868)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003541208.1 (35395..39436, complement)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene NEDD8 activating enzyme E1 subunit 1 Neighboring gene carbonic anhydrase 7 Neighboring gene uncharacterized LOC106508763 Neighboring gene cadherin 16 Neighboring gene RRAD, Ras related glycolysis inhibitor and calcium channel regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
Names
pyruvate dehyrogenase phosphatase catalytic subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    27565423..27572868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021094015.1 → XP_020949674.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Related
    ENSSSCP00000074526.1, ENSSSCT00000088921.1
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_021094016.1 → XP_020949675.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Related
    ENSSSCP00000066909.1, ENSSSCT00000075077.2
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  3. XM_021094014.1 → XP_020949673.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  4. XM_021094011.1 → XP_020949670.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Related
    ENSSSCP00000068606.1, ENSSSCT00000070675.1
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  5. XM_021094018.1 → XP_020949677.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Related
    ENSSSCP00000050483.1, ENSSSCT00000038130.3
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  6. XM_021094012.1 → XP_020949671.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  7. XM_021094013.1 → XP_020949672.1  pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial

    UniProtKB/TrEMBL
    A0A0B8RTD8, A0A287B2X3, A0A4X1ULK6, A0A8D0X889, A0A8D0ZSS1
    Conserved Domains (1) summary
    cd00143
    Location:111 → 519
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein Strain
Heading Accession and Version

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