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NTM neurotrimin [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100601828, updated on 8-Mar-2024

Summary

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Gene symbol
NTM
Gene description
neurotrimin
See related
EnsemblRapid:ENSNLEG00000032081
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 15 NC_044395.1 (2625208..3595023, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 15 NC_019830.1 (2774580..3756253, complement)

Chromosome 15 - NC_044395.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene opioid binding protein/cell adhesion molecule like Neighboring gene uncharacterized LOC115838585 Neighboring gene uncharacterized LOC115838622 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene sorting nexin 19 Neighboring gene bcl-2 homologous antagonist/killer pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurotrimin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044395.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    2625208..3595023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012495988.2 → XP_012351442.1  neurotrimin isoform X12

    UniProtKB/TrEMBL
    A0A2I3G547
    Related
    ENSNLEP00000026967.1, ENSNLET00000038492.2
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  2. XM_012495986.2 → XP_012351440.1  neurotrimin isoform X10

    Related
    ENSNLEP00000042013.2, ENSNLET00000059775.2
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  3. XM_030829620.1 → XP_030685480.1  neurotrimin isoform X9

    Related
    ENSNLEP00000034122.2, ENSNLET00000041213.2
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  4. XM_030829622.1 → XP_030685482.1  neurotrimin isoform X13

    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  5. XM_012495987.2 → XP_012351441.1  neurotrimin isoform X11

    See identical proteins and their annotated locations for XP_012351441.1

    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  6. XM_030829615.1 → XP_030685475.1  neurotrimin isoform X5

    Conserved Domains (3) summary
    smart00410
    Location:266 → 343
    IG_like; Immunoglobulin like
    pfam13927
    Location:169 → 238
    Ig_3; Immunoglobulin domain
    cl11960
    Location:77 → 165
    Ig; Immunoglobulin domain

  7. XM_030829616.1 → XP_030685476.1  neurotrimin isoform X6

    Conserved Domains (3) summary
    smart00410
    Location:266 → 343
    IG_like; Immunoglobulin like
    pfam13927
    Location:169 → 238
    Ig_3; Immunoglobulin domain
    cl11960
    Location:77 → 165
    Ig; Immunoglobulin domain

  8. XM_030829619.1 → XP_030685479.1  neurotrimin isoform X8

    Conserved Domains (3) summary
    smart00410
    Location:266 → 343
    IG_like; Immunoglobulin like
    pfam13927
    Location:169 → 238
    Ig_3; Immunoglobulin domain
    cl11960
    Location:77 → 165
    Ig; Immunoglobulin domain

  9. XM_030829623.1 → XP_030685483.1  neurotrimin isoform X14

    Conserved Domains (3) summary
    pfam13927
    Location:181 → 258
    Ig_3; Immunoglobulin domain
    cd00096
    Location:182 → 188
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:3 → 91
    Ig; Immunoglobulin domain

  10. XM_030829614.1 → XP_030685474.1  neurotrimin isoform X4

    Conserved Domains (3) summary
    smart00410
    Location:266 → 343
    IG_like; Immunoglobulin like
    pfam13927
    Location:169 → 238
    Ig_3; Immunoglobulin domain
    cl11960
    Location:77 → 165
    Ig; Immunoglobulin domain

  11. XM_030829612.1 → XP_030685472.1  neurotrimin isoform X2

    Conserved Domains (3) summary
    smart00410
    Location:233 → 310
    IG_like; Immunoglobulin like
    pfam13927
    Location:136 → 205
    Ig_3; Immunoglobulin domain
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  12. XM_030829613.1 → XP_030685473.1  neurotrimin isoform X3

    Conserved Domains (3) summary
    smart00410
    Location:224 → 301
    IG_like; Immunoglobulin like
    pfam13927
    Location:127 → 196
    Ig_3; Immunoglobulin domain
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  13. XM_030829618.1 → XP_030685478.1  neurotrimin isoform X7

    Conserved Domains (3) summary
    smart00410
    Location:192 → 269
    IG_like; Immunoglobulin like
    pfam13927
    Location:95 → 164
    Ig_3; Immunoglobulin domain
    cl11960
    Location:3 → 91
    Ig; Immunoglobulin domain

  14. XM_030829611.1 → XP_030685471.1  neurotrimin isoform X1

    Conserved Domains (3) summary
    smart00410
    Location:266 → 343
    IG_like; Immunoglobulin like
    pfam13927
    Location:169 → 238
    Ig_3; Immunoglobulin domain
    cl11960
    Location:77 → 165
    Ig; Immunoglobulin domain

  15. XM_030829617.1 → XP_030685477.1  neurotrimin isoform X7

    Conserved Domains (3) summary
    smart00410
    Location:192 → 269
    IG_like; Immunoglobulin like
    pfam13927
    Location:95 → 164
    Ig_3; Immunoglobulin domain
    cl11960
    Location:3 → 91
    Ig; Immunoglobulin domain
Nucleotide Protein
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