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ALKBH8 alkB homolog 8, tRNA methyltransferase [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100593027, updated on 8-Mar-2024

Summary

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Gene symbol
ALKBH8
Gene description
alkB homolog 8, tRNA methyltransferase
See related
EnsemblRapid:ENSNLEG00000007217
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See ALKBH8 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 15 NC_044395.1 (27356547..27427251)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 15 NC_019830.1 (28105498..28175830)

Chromosome 15 - NC_044395.1Genomic Context describing neighboring genes Neighboring gene MOB-like protein phocein Neighboring gene ELMO domain containing 1 Neighboring gene translation initiation factor IF-2-like Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 pseudogene Neighboring gene argininosuccinate synthase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044395.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    27356547..27427251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004090577.3 → XP_004090625.1  alkylated DNA repair protein alkB homolog 8

    UniProtKB/TrEMBL
    G1R6H7
    Related
    ENSNLEP00000008799.3, ENSNLET00000009218.3
    Conserved Domains (4) summary
    pfam09004
    Location:4 → 40
    DUF1891; Domain of unknown function (DUF1891)
    cd12431
    Location:45 → 125
    RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
    pfam13649
    Location:413 → 500
    Methyltransf_25; Methyltransferase domain
    cl21496
    Location:172 → 306
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

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